SOFTWARE SOURCE AND BINARY DOWNLOAD
Please do not use download accelerators to download these files without limiting your connections to a reasonable number.
Please download the lastest version for better performance, if you have difficulty running BALM, please contact the author at xun.lan@osumc.edu
Any suggestions or comments will be appreciated, thank you.
- SOFTWARE UPDATE 10/29/2010: fixed problem caused by low level threshold (set by the -p option)
- SOFTWARE UPDATE 10/31/2010: fixed problem caused by low depth of input/control data
Download BALM for 64bit linux system (multithreaded).
Download BALM for 64bit linux system (single threaded).
Download BALM for x64 edition of Windows 7, Vista and XP (multithreaded).
Download BALM for x64 edition of Windows 7, Vista and XP (single threaded).
NOTE, BALM currently do not support 32 bit windows operating system.
Download BALM for Mac OS X (Intel Mac only).
Download C++ source code for BALM.
Download BALM README for instructions and system requirements.
Java GUI for BALM
ChIP-SEQ DATASET DOWNLOAD
| TREATEMENT DATA | CTCF | NRSF | ER | FOXA1 |
| CONTROL DATA | Lack of control data | NRSF-control | ER-control | FOXA1-control |
PUBLIC MBD-SEQ DATASET DOWNLOAD
| Cell line | H1 | T cell | HCT116 |
MCF-7 MBD-SEQ DATA DOWNLOAD
| elutions | 500mM | 1000mM | 2000mM | input |
| tag alignment | 500mM_raw | 1000mM_raw | 2000mM_raw | input_raw |
| wiggle file | 500mM_wig | 1000mM_wig | 2000mM_wig | input_wig |
| CpG score | 500mM_CpG_score | 1000mM_CpG_score | 2000mM_CpG_score | N/A |
CpG coordinates file DOWNLOAD
| Genome assembly | hg18 | hg19 | mm8 | mm9 |
| ss10 | galGal3 |